FELBuilder
FELBuilder is an automated Python pipeline that automates the complex workflow of Principal Component Analysis (PCA) and Free Energy Landscape (FEL) analysis from Molecular Dynamics (MD) trajectories
What XERJ indexed
Snapshot
The whole repository at commit c62f11c6bf. It is the newest commit on main.
Selected work
Licence
The repository
LICENSE file checked at the pinned commit; the author agreed to inclusion.
The XERJ corpus
The owner added it on hub.xerj.org after signing in with GitHub, on 2026-10-28. Same terms as the repository. Answers name the repo, the commit and the file:line.
selected for the XERJ Corpus Hublicence clearedsuggested use: adapt with attribution
felmdmd-simulationmolecular-dynamicspcaprincipal-component-analysistrajectory-analysistrajectory-clustering
Example questions
- How does FELBuilder implement fel?
- Show the md code in FELBuilder.
The prompt
Paste it into your AI agent. It clones AtharvaTilewale/FELBuilder at the pinned commit and indexes it on your machine.
Search the GitHub repository AtharvaTilewale/FELBuilder with XERJ (https://hub.xerj.org/corpus/atharvatilewale--felbuilder). Run these in a shell, in order, and check each result before the next: 1. xerj --help (success: it prints usage). If xerj is missing: curl -fsSL https://xerj.org/get | sh 2. git clone https://github.com/AtharvaTilewale/FELBuilder FELBuilder && git -C FELBuilder checkout c62f11c6bfa8799d4341b375f3e1c3dfde92d5bb 3. Start a local node and leave it running: xerj --insecure --data-dir ./xerj-data 4. xerj autoindex ./FELBuilder --url http://127.0.0.1:9200 --prefix felbuilder --progress plain 5. xerj autoindex map --url http://127.0.0.1:9200 Then answer my question from the indexed files and cite the ax_path of every hit. Query syntax: https://xerj.org/llms.txt Licence: MIT. Keep the copyright notice and credit the authors.
Related
Atharva TilewaleWeb and frontend platform corporaAtharvaTilewale/ConformAtlasSamoTech/skills-treemmb-irb/MDDB-workflow
Stats: GitHub API, fetched 2026-10-31. Snapshot: the git tree at the pinned commit. Selected work and consent: the XERJ registry.