nf-diff

Nextflow plugin to compare runs

A new way for AI to search for data
View on GitHub
12GitHub stars

What XERJ indexed

Snapshot

Whole repository

The whole repository at commit b9d8ae3dd1 (2026-10-11).

Selected work

Marcel Ribeiro-Dantas
@mribeirodantas

“only report git-revision drift for real commits of the launch repo”. 6 files, 222 lines in src/test, src/main.

Licence

The repository

Apache-2.0

Checked by a person at the pinned commit.

The XERJ corpus

Apache-2.0, with credit

The author agreed by email on 2026-10-19. Same terms as the repository. Answers name the repo, the commit and the file:line.

in licence reviewnot in the hub yetsuggested use: adapt with attribution

nextflowplugin

Example questions

The prompt

Paste it into your AI agent. It clones mribeirodantas/nf-diff at the pinned commit and indexes it on your machine.

Search the GitHub repository mribeirodantas/nf-diff with XERJ (https://hub.xerj.org/corpus/mribeirodantas--nf-diff).
Run these in a shell, in order, and check each result before the next:
1. xerj --help  (success: it prints usage). If xerj is missing: curl -fsSL https://xerj.org/get | sh
2. git clone https://github.com/mribeirodantas/nf-diff nf-diff && git -C nf-diff checkout b9d8ae3dd11f6992861408eafedd9b181d20dbb4
3. Start a local node and leave it running: xerj --insecure --data-dir ./xerj-data
4. xerj autoindex ./nf-diff --url http://127.0.0.1:9200 --prefix nf-diff --progress plain
5. xerj autoindex map --url http://127.0.0.1:9200
Then answer my question from the indexed files and cite the ax_path of every hit. Query syntax: https://xerj.org/llms.txt
Licence: Apache-2.0. Keep the copyright notice and credit the authors.

Related

Selected work and consent: the XERJ registry.