BioGrid

A whole-brain spiking model of the FlyWire fruit fly connectome that screens 140 sensory types for steering pathways and predicts a…

A new way for AI to search for data
View on GitHub
4GitHub stars

C++, Python

What XERJ indexed

Snapshot

Whole repository

The whole repository at commit 681eadfb49 (2026-10-15).

Selected work

dorywoof
@dorywoof

“Add BioGrid: a fly flown by the whole FlyWire brain”. 9 files, 2,006 lines in biogrid, tools.

Licence

The repository

MIT

Checked by a person at the pinned commit.

The XERJ corpus

MIT, with credit

The author agreed by email on 2026-10-16. Same terms as the repository. Answers name the repo, the commit and the file:line.

in licence reviewnot in the hub yetsuggested use: adapt with attribution

computational-neuroscienceconnectomecppdrosophilaflywireneurosciencesfmlsimulation

Example questions

The prompt

Paste it into your AI agent. It clones dorywoof/BioGrid at the pinned commit and indexes it on your machine.

Search the GitHub repository dorywoof/BioGrid with XERJ (https://hub.xerj.org/corpus/dorywoof--biogrid).
Run these in a shell, in order, and check each result before the next:
1. xerj --help  (success: it prints usage). If xerj is missing: curl -fsSL https://xerj.org/get | sh
2. git clone https://github.com/dorywoof/BioGrid BioGrid && git -C BioGrid checkout 681eadfb49bc3eb48216d9969db722cc0239b8f7
3. Start a local node and leave it running: xerj --insecure --data-dir ./xerj-data
4. xerj autoindex ./BioGrid --url http://127.0.0.1:9200 --prefix biogrid --progress plain
5. xerj autoindex map --url http://127.0.0.1:9200
Then answer my question from the indexed files and cite the ax_path of every hit. Query syntax: https://xerj.org/llms.txt
Licence: MIT. Keep the copyright notice and credit the authors.

Related

Selected work and consent: the XERJ registry.