PlateLibrary

A simple, SQLite-backed plate library for microscopy investigations, with lightweight tools for data entry, exploration, and export

A new way for AI to search for data
View on GitHub
0GitHub stars
116commits on main
0forks
1.16.0latest release, 2026-08-24

Python 97.8%, Shell 2%, Dockerfile 0.2% · created 2026-03-25 · last push 2026-08-24

What XERJ indexed

Snapshot

139 files · 555.7 KB

The whole repository at commit bfd54d0889. It is the newest commit on main.

Selected work

Dave Walker
@davewalker5

Licence

The repository

MIT

LICENSE file checked at the pinned commit; the author agreed to inclusion.

The XERJ corpus

MIT, with credit

The owner added it on hub.xerj.org after signing in with GitHub, on 2026-10-31. Same terms as the repository. Answers name the repo, the commit and the file:line.

selected for the XERJ Corpus Hublicence clearedsuggested use: adapt with attribution

microscopypythonsqlitemicroscopy-images

Example questions

Inside the indexed corpus

Licence on GitHub and in the corpus

GitHub reported MIT for davewalker5/PlateLibrary on 2026-10-31, and the LICENSE file at commit bfd54d0889 was reviewed as MIT. They match, so answers from this corpus carry the same terms as the live repository.

Contributors

Dave Walker (@davewalker5) has 14 selected repositories on the hub.

Their other repository pages: davewalker5/ADS-B-BaseStationReader, davewalker5/FossilTracker, davewalker5/ChromatophoreSimulator, davewalker5/OctopusController, davewalker5/FishTrack, davewalker5/LogSpiral.

Using XERJ with PlateLibrary

The prompt

Paste it into your AI agent. It clones davewalker5/PlateLibrary at the pinned commit and indexes it on your machine.

Search the GitHub repository davewalker5/PlateLibrary with XERJ (https://hub.xerj.org/corpus/davewalker5--platelibrary).
Run these in a shell, in order, and check each result before the next:
1. xerj --help  (success: it prints usage). If xerj is missing: curl -fsSL https://xerj.org/get | sh
2. git clone https://github.com/davewalker5/PlateLibrary PlateLibrary && git -C PlateLibrary checkout bfd54d0889734001f38aaf8a4735e8d991de4ebb
3. Start a local node and leave it running: xerj --insecure --data-dir ./xerj-data
4. xerj autoindex ./PlateLibrary --url http://127.0.0.1:9200 --prefix platelibrary --progress plain
5. xerj autoindex map --url http://127.0.0.1:9200
Then answer my question from the indexed files and cite the ax_path of every hit. Query syntax: https://xerj.org/llms.txt
Licence: MIT. Keep the copyright notice and credit the authors.

Related

Stats: GitHub API, fetched 2026-10-31. Snapshot: the git tree at the pinned commit. Selected work and consent: the XERJ registry.