cell-ontology
reference corpus · status live · domain HEALTH (Health and clinical reference) · lane A · refresh pinned · tags GLOBAL · CELL-TYPES · HISTOLOGY · IMMUNOLOGY · ONTOLOGY
What an agent uses it for
An agent labeling cell types in pathology/histology/immunology pipelines queries this for the Cell Ontology (CL) of in-vivo cell types.
curl -fsSLO https://raw.githubusercontent.com/xerj-org/xerj/corpus-hub/tools/xerj-code/hub/cell-ontology.jsonxerj corpus add --from ./cell-ontology.jsonxerj corpus index cell-ontology then xerj code cell-ontology "your question"Needs the xerj CLI and a local node running; the copy prompt covers both, checks each step, and shows how to stop only the node you started. No shell: the MCP tool xerj_code_search with corpus: "cell-ontology", once the corpus is indexed on the node.
Sources and pins
| source | pin | licence | size | review note |
|---|---|---|---|---|
| cell-ontology | b7cb31d4d3ea | CC-BY-4.0 | 214.5 MB / 332 files | licence host-verified (ok-spdx): CC-BY-4.0 |
214.5 MB across 332 files. Added 2026-10-13.
Rights
CC-BY-4.0. Redistribution permitted with attribution per the licence review. The review block records a human opening each licence file at the pin. Detector output is a hint, never the verdict.
Retrieval spot-check (G7)
Not yet spot-checked. Queries are pre-registered in the registry before grading.