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caliber-ehr-phenotypes

reference corpus · status live · domain HEALTH (Health and clinical reference) · lane A · refresh pinned · tags GLOBAL · PHENOTYPES · EHR · CLINICAL-CODELISTS · CALIBER · READ-CODES

What an agent uses it for

health

Use it
curl -fsSLO https://raw.githubusercontent.com/xerj-org/xerj/corpus-hub/tools/xerj-code/hub/caliber-ehr-phenotypes.json
xerj corpus add --from ./caliber-ehr-phenotypes.json
xerj corpus index caliber-ehr-phenotypes then xerj code caliber-ehr-phenotypes "your question"

Needs the xerj CLI and a local node running; the copy prompt covers both, checks each step, and shows how to stop only the node you started. No shell: the MCP tool xerj_code_search with corpus: "caliber-ehr-phenotypes", once the corpus is indexed on the node.

Sources and pins

sourcepinlicencesizereview note
chronological-map-phenotypes f4f614fc88c6MIT 3.7 MB / 615 files Decoded LICENSE: MIT 'Copyright (c) 2019 Spiros Denaxas' - matches. Repo HTTP 200; API size 1.4MB. CALIBER machine-readable EHR phenotype code-lists (ICD-10/OPCS/CPRD Read) -> adapt-with-attribution (cite Denaxas/CALIBER).

3.7 MB across 615 files. Added 2026-10-13.

Rights

MIT. Redistribution permitted with attribution per the licence review. The review block records a human opening each licence file at the pin. Detector output is a hint, never the verdict.

Retrieval spot-check (G7)

Not yet spot-checked. Queries are pre-registered in the registry before grading.